Add patch files for open source packages

Patches/README.md

@@ -0,0 +1,24 @@
+This directory contains patch files to enable cotire for some popular open sources packages that
+use CMake as a build system.
+
+For example, to apply Cotire to LLVM 3.0, first copy `cotire.cmake` to a directory on the CMake
+module search path (e.g., `llvm-3.0.src/cmake/modules`).
+
+Then apply the corresponding patch:
+
+    $ cd /path/to/llvm-3.0.src
+    $ patch -p1 < /path/to/llvm-3.0.src.patch
+
+Then proceed with an out-of-source Cmake build:
+
+    $ mkdir build; cd build
+    $ cmake ..
+    -- The C compiler identification is GNU 4.2.1
+    -- The CXX compiler identification is Clang 3.1.0
+    ...
+    $ make
+    [  0%] Generating C unity source lib/Support/cotire/LLVMSupport_C_unity.c
+    [  0%] Generating CXX unity source lib/Support/cotire/LLVMSupport_CXX_unity.cxx
+    [  0%] Generating CXX prefix header lib/Support/cotire/LLVMSupport_CXX_prefix.hxx
+    [  0%] Building CXX precompiled header lib/Support/cotire/LLVMSupport_CXX_prefix.hxx.gch
+    ...

Patches/bullet-2.80-rev2531.patch

@@ -0,0 +1,389 @@
+diff -rupN bullet-2.80-rev2531/CMakeLists.txt bullet-2.80-rev2531.cotire/CMakeLists.txt
+--- bullet-2.80-rev2531/CMakeLists.txt	2012-03-03 04:15:04.000000000 +0100
+@@ -11,6 +11,7 @@ IF(COMMAND cmake_policy)
+    cmake_policy(SET CMP0003 NEW)
+ ENDIF(COMMAND cmake_policy)
+ 
++include("${CMAKE_SOURCE_DIR}/cotire.cmake") 
+ 
+ IF (NOT CMAKE_BUILD_TYPE)
+ # SET(CMAKE_BUILD_TYPE "Debug")
+diff -rupN bullet-2.80-rev2531/Demos/OpenGL/CMakeLists.txt bullet-2.80-rev2531.cotire/Demos/OpenGL/CMakeLists.txt
+--- bullet-2.80-rev2531/Demos/OpenGL/CMakeLists.txt	2011-09-13 03:52:42.000000000 +0200
+@@ -65,3 +65,7 @@ IF (${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+ 	ENDIF (INSTALL_EXTRA_LIBS)
+ ENDIF (${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 2.5)
++
++if (COMMAND cotire)
++	cotire(OpenGLSupport)
++endif()
+diff -rupN bullet-2.80-rev2531/Extras/ConvexDecomposition/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/ConvexDecomposition/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/ConvexDecomposition/CMakeLists.txt	2010-09-18 02:24:50.000000000 +0200
+@@ -62,3 +62,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR} FILES
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_EXTRA_LIBS)
++
++if (COMMAND cotire)
++	cotire(ConvexDecomposition)
++endif()
+diff -rupN bullet-2.80-rev2531/Extras/GIMPACTUtils/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/GIMPACTUtils/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/GIMPACTUtils/CMakeLists.txt	2010-09-18 02:24:50.000000000 +0200
+@@ -35,3 +35,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR} FILES
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_EXTRA_LIBS)
++
++if (COMMAND cotire)
++	cotire(GIMPACTUtils)
++endif()
+diff -rupN bullet-2.80-rev2531/Extras/HACD/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/HACD/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/HACD/CMakeLists.txt	2011-07-07 02:28:15.000000000 +0200
+@@ -49,3 +49,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR} FILES
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+
+ ENDIF (INSTALL_EXTRA_LIBS)
+
++
+
++if (COMMAND cotire)
+
++	cotire(HACD)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/Extras/PhysicsEffects/src/base_level/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/PhysicsEffects/src/base_level/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/PhysicsEffects/src/base_level/CMakeLists.txt	2012-03-05 05:59:58.000000000 +0100
+@@ -75,3 +75,7 @@ ADD_LIBRARY(PfxBaseLevel ${PfxBaseLevel_
+ 
+
+ SET_TARGET_PROPERTIES(PfxBaseLevel PROPERTIES VERSION ${BULLET_VERSION})
+
+ SET_TARGET_PROPERTIES(PfxBaseLevel PROPERTIES SOVERSION ${BULLET_VERSION})
+
++
+
++if (COMMAND cotire)
+
++	cotire(PfxBaseLevel)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/Extras/PhysicsEffects/src/low_level/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/PhysicsEffects/src/low_level/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/PhysicsEffects/src/low_level/CMakeLists.txt	2012-03-05 05:59:58.000000000 +0100
+@@ -27,3 +27,7 @@ ADD_LIBRARY(PfxLowLevel ${PfxLowLevel_SR
+ 
+
+ SET_TARGET_PROPERTIES(PfxLowLevel PROPERTIES VERSION ${BULLET_VERSION})
+
+ SET_TARGET_PROPERTIES(PfxLowLevel PROPERTIES SOVERSION ${BULLET_VERSION})
+
++
+
++if (COMMAND cotire)
+
++	cotire(PfxLowLevel)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/Extras/PhysicsEffects/src/util/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/PhysicsEffects/src/util/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/PhysicsEffects/src/util/CMakeLists.txt	2012-03-05 05:59:58.000000000 +0100
+@@ -18,3 +18,7 @@ ADD_LIBRARY(PfxUtil ${PfxUtil_SRCS} ${Pf
+ 
+
+ SET_TARGET_PROPERTIES(PfxUtil PROPERTIES VERSION ${BULLET_VERSION})
+
+ SET_TARGET_PROPERTIES(PfxUtil PROPERTIES SOVERSION ${BULLET_VERSION})
+
++
+
++if (COMMAND cotire)
+
++	cotire(PfxUtil)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/Extras/Serialize/BlenderSerialize/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/Serialize/BlenderSerialize/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/Serialize/BlenderSerialize/CMakeLists.txt	2010-03-06 16:23:36.000000000 +0100
+@@ -5,3 +5,7 @@ ${BULLET_PHYSICS_SOURCE_DIR}/Extras/Seri
+ )
+ 
+ ADD_LIBRARY(BlenderSerialize dna249.cpp dna249-64bit.cpp bBlenderFile.cpp  bBlenderFile.h bMain.cpp bMain.h )
++
++if (COMMAND cotire)
++	cotire(BlenderSerialize)
++endif()
+diff -rupN bullet-2.80-rev2531/Extras/Serialize/BulletFileLoader/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/Serialize/BulletFileLoader/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/Serialize/BulletFileLoader/CMakeLists.txt	2012-02-29 05:43:51.000000000 +0100
+@@ -47,3 +47,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR} FILES
+                 ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+         ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_EXTRA_LIBS)
++
++if (COMMAND cotire)
++	cotire(BulletFileLoader)
++endif()
+diff -rupN bullet-2.80-rev2531/Extras/Serialize/BulletWorldImporter/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/Serialize/BulletWorldImporter/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/Serialize/BulletWorldImporter/CMakeLists.txt	2012-02-29 05:43:51.000000000 +0100
+@@ -36,3 +36,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR} FILES
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_EXTRA_LIBS)
++
++if (COMMAND cotire)
++	cotire(BulletWorldImporter)
++endif()
+diff -rupN bullet-2.80-rev2531/Extras/Serialize/makesdna/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/Serialize/makesdna/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/Serialize/makesdna/CMakeLists.txt	2010-03-06 16:23:36.000000000 +0100
+@@ -35,3 +35,7 @@ SET(SRC  ${BULLET_PHYSICS_SOURCE_DIR}/sr
+ ADD_LIBRARY(BulletDNA ${SRC} ${INC_FILES})
+ 
+ MESSAGE(STATUS "Configuring makesdna")
++
++if (COMMAND cotire)
++	cotire(BulletDNA)
++endif()
+diff -rupN bullet-2.80-rev2531/Extras/glui/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/glui/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/glui/CMakeLists.txt	2010-03-06 16:23:36.000000000 +0100
+@@ -64,3 +64,7 @@ arcball.cpp			glui_button.cpp			glui_fil
+ IF (BUILD_SHARED_LIBS)
+   TARGET_LINK_LIBRARIES(GLUI ${GLUT_glut_LIBRARY} ${OPENGL_gl_LIBRARY} ${OPENGL_glu_LIBRARY})
+ ENDIF (BUILD_SHARED_LIBS)
++
++if (COMMAND cotire)
++	cotire(GLUI)
++endif()
+diff -rupN bullet-2.80-rev2531/Extras/iff/CMakeLists.txt bullet-2.80-rev2531.cotire/Extras/iff/CMakeLists.txt
+--- bullet-2.80-rev2531/Extras/iff/CMakeLists.txt	2010-03-06 16:23:36.000000000 +0100
+@@ -9,3 +9,7 @@ iffw.cpp
+ )
+ 
+ #SUBDIRS( BulletIffConverter )
++
++if (COMMAND cotire)
++	cotire(Iff)
++endif()
+diff -rupN bullet-2.80-rev2531/UnitTests/cppunit/CMakeLists.txt bullet-2.80-rev2531.cotire/UnitTests/cppunit/CMakeLists.txt
+--- bullet-2.80-rev2531/UnitTests/cppunit/CMakeLists.txt	2010-07-24 00:09:57.000000000 +0200
+@@ -71,4 +71,8 @@ ADD_LIBRARY(cppunit
+
+ 	src/cppunit/XmlDocument.cpp
+
+ 	src/cppunit/XmlElement.cpp
+
+ 	
+
+-)
+\ No newline at end of file
++)
+
++
+
++if (COMMAND cotire)
+
++	cotire(cppunit)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/src/BulletCollision/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletCollision/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletCollision/CMakeLists.txt	2012-02-29 06:19:22.000000000 +0100
+@@ -277,3 +277,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR}/Bulle
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_LIBS)
++
++if (COMMAND cotire)
++	cotire(BulletCollision)
++endif()
+diff -rupN bullet-2.80-rev2531/src/BulletDynamics/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletDynamics/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletDynamics/CMakeLists.txt	2011-09-15 20:47:13.000000000 +0200
+@@ -110,3 +110,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR}/Bulle
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_LIBS)
++
++if (COMMAND cotire)
++	cotire(BulletDynamics)
++endif()
+diff -rupN bullet-2.80-rev2531/src/BulletMultiThreaded/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletMultiThreaded/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletMultiThreaded/CMakeLists.txt	2012-02-29 06:19:22.000000000 +0100
+@@ -121,3 +121,6 @@ PATTERN "*.h"  PATTERN ".svn" EXCLUDE PA
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_LIBS)
+ 
++if (COMMAND cotire)
++	cotire(BulletMultiThreaded)
++endif()
+diff -rupN bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/DX11/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletMultiThreaded/GpuSoftBodySolvers/DX11/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/DX11/CMakeLists.txt	2011-11-11 20:00:26.000000000 +0100
+@@ -81,3 +81,7 @@ IF (INSTALL_LIBS)
+
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+
+ ENDIF (INSTALL_LIBS)
+
++
+
++if (COMMAND cotire)
+
++	cotire(BulletSoftBodySolvers_DX11)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/AMD/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/AMD/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/AMD/CMakeLists.txt	2011-12-20 19:03:24.000000000 +0100
+@@ -60,3 +60,7 @@ IF (INSTALL_LIBS)
+
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+
+ ENDIF (INSTALL_LIBS)
+
++
+
++if (COMMAND cotire)
+
++	cotire(BulletSoftBodySolvers_OpenCL_AMD)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/Apple/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/Apple/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/Apple/CMakeLists.txt	2011-11-11 20:00:26.000000000 +0100
+@@ -75,3 +75,7 @@ IF (INSTALL_LIBS)
+
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+
+ ENDIF (INSTALL_LIBS)
+
++
+
++if (COMMAND cotire)
+
++	cotire(BulletSoftBodySolvers_OpenCL_Apple)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/Intel/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/Intel/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/Intel/CMakeLists.txt	2011-12-20 19:03:24.000000000 +0100
+@@ -80,3 +80,7 @@ IF (INSTALL_LIBS)
+
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+
+ ENDIF (INSTALL_LIBS)
+
++
+
++if (COMMAND cotire)
+
++	cotire(BulletSoftBodySolvers_OpenCL_Intel)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/MiniCL/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/MiniCL/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/MiniCL/CMakeLists.txt	2011-11-11 20:00:26.000000000 +0100
+@@ -73,3 +73,7 @@ IF (INSTALL_LIBS)
+
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+
+ ENDIF (INSTALL_LIBS)
+
++
+
++if (COMMAND cotire)
+
++	cotire(BulletSoftBodySolvers_OpenCL_Mini)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/NVidia/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/NVidia/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletMultiThreaded/GpuSoftBodySolvers/OpenCL/NVidia/CMakeLists.txt	2011-12-20 19:03:24.000000000 +0100
+@@ -79,3 +79,7 @@ IF (INSTALL_LIBS)
+
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+
+ ENDIF (INSTALL_LIBS)
+
++
+
++if (COMMAND cotire)
+
++	cotire(BulletSoftBodySolvers_OpenCL_NVidia)
+
++endif()
+
+diff -rupN bullet-2.80-rev2531/src/BulletSoftBody/CMakeLists.txt bullet-2.80-rev2531.cotire/src/BulletSoftBody/CMakeLists.txt
+--- bullet-2.80-rev2531/src/BulletSoftBody/CMakeLists.txt	2010-12-01 06:55:08.000000000 +0100
+@@ -63,3 +63,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR} FILES
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_LIBS)
++
++if (COMMAND cotire)
++	cotire(BulletSoftBody)
++endif()
+diff -rupN bullet-2.80-rev2531/src/LinearMath/CMakeLists.txt bullet-2.80-rev2531.cotire/src/LinearMath/CMakeLists.txt
+--- bullet-2.80-rev2531/src/LinearMath/CMakeLists.txt	2011-11-11 21:11:03.000000000 +0100
+@@ -64,3 +64,7 @@ DESTINATION ${INCLUDE_INSTALL_DIR} FILES
+ 		ENDIF (APPLE AND BUILD_SHARED_LIBS AND FRAMEWORK)
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+ ENDIF (INSTALL_LIBS)
++
++if (COMMAND cotire)
++	cotire(LinearMath)
++endif()
+diff -rupN bullet-2.80-rev2531/src/MiniCL/CMakeLists.txt bullet-2.80-rev2531.cotire/src/MiniCL/CMakeLists.txt
+--- bullet-2.80-rev2531/src/MiniCL/CMakeLists.txt	2012-02-29 06:19:22.000000000 +0100
+@@ -64,3 +64,6 @@ PATTERN "*.h"  PATTERN ".svn" EXCLUDE PA
+ 	ENDIF (NOT INTERNAL_CREATE_DISTRIBUTABLE_MSVC_PROJECTFILES)
+
+ ENDIF (INSTALL_LIBS)
+
+ 
+
++if (COMMAND cotire)
+
++	cotire(MiniCL)
+
++endif()
+

Patches/clang-3.0.src.patch

@@ -0,0 +1,35 @@
+diff -rupN clang-3.0.src/CMakeLists.txt clang-3.0.src.cotire/CMakeLists.txt
+--- clang-3.0.src/CMakeLists.txt	2011-10-06 15:03:08.000000000 +0200
+@@ -36,6 +36,7 @@ if( CMAKE_SOURCE_DIR STREQUAL CMAKE_CURR
+   include(TableGen)
+   include("${CLANG_PATH_TO_LLVM_BUILD}/share/llvm/cmake/LLVMConfig.cmake")
+   include(HandleLLVMOptions)
++  include(cotire)
+ 
+   set(PACKAGE_VERSION "${LLVM_PACKAGE_VERSION}")
+ 
+@@ -206,6 +207,11 @@ macro(add_clang_library name)
+     LIBRARY DESTINATION lib${LLVM_LIBDIR_SUFFIX}
+     ARCHIVE DESTINATION lib${LLVM_LIBDIR_SUFFIX})
+   set_target_properties(${name} PROPERTIES FOLDER "Clang libraries")
++  if (COMMAND cotire)
++    if (NOT "${name}" MATCHES "libclang")
++      cotire(${name})
++    endif()
++  endif()
+ endmacro(add_clang_library)
+ 
+ macro(add_clang_executable name)
+diff -rupN clang-3.0.src/tools/libclang/CMakeLists.txt clang-3.0.src.cotire/tools/libclang/CMakeLists.txt
+--- clang-3.0.src/tools/libclang/CMakeLists.txt	2011-10-06 09:00:54.000000000 +0200
+@@ -70,3 +70,8 @@ if( NOT BUILD_SHARED_LIBS AND NOT WIN32 
+     PROPERTIES
+     OUTPUT_NAME "libclang")
+ endif()
++
++if (COMMAND cotire)
++  cotire(libclang)
++  cotire(${LIBCLANG_STATIC_TARGET_NAME})
++endif()

Patches/clapack-3.2.1-CMAKE.patch

@@ -0,0 +1,93 @@
+diff -rupN clapack-3.2.1-CMAKE/BLAS/SRC/CMakeLists.txt clapack-3.2.1-CMAKE.cotire/BLAS/SRC/CMakeLists.txt
+--- clapack-3.2.1-CMAKE/BLAS/SRC/CMakeLists.txt	2009-08-14 22:16:25.000000000 +0200
+@@ -141,3 +141,13 @@ if(UNIX)
+   target_link_libraries(blas m)
+ endif()
+ target_link_libraries(blas f2c)
++
++if (COMMAND cotire)
++	cotire(blas)
++	if (TARGET blas_unity)
++		if(UNIX)
++		  target_link_libraries(blas_unity m)
++		endif()
++		target_link_libraries(blas_unity f2c_unity)
++	endif()
++endif()
+diff -rupN clapack-3.2.1-CMAKE/CMakeLists.txt clapack-3.2.1-CMAKE.cotire/CMakeLists.txt
+--- clapack-3.2.1-CMAKE/CMakeLists.txt	2009-08-10 20:46:33.000000000 +0200
+@@ -2,6 +2,7 @@ cmake_minimum_required(VERSION 2.6)
+ project(CLAPACK C)
+ enable_testing()
+ include(CTest)
++include("${CMAKE_SOURCE_DIR}/cotire.cmake")
+ 
+ if(WIN32 AND NOT CYGWIN)
+   set(SECOND_SRC  ${CLAPACK_SOURCE_DIR}/INSTALL/winsecond.c)
+diff -rupN clapack-3.2.1-CMAKE/F2CLIBS/libf2c/CMakeLists.txt clapack-3.2.1-CMAKE.cotire/F2CLIBS/libf2c/CMakeLists.txt
+--- clapack-3.2.1-CMAKE/F2CLIBS/libf2c/CMakeLists.txt	2009-08-10 20:06:06.000000000 +0200
+@@ -60,3 +60,6 @@ include_directories(${CLAPACK_SOURCE_DIR
+ include_directories(${CLAPACK_BINARY_DIR}/F2CLIBS/libf2c)
+ add_library(f2c ${OFILES} ${CMAKE_CURRENT_BINARY_DIR}/arith.h)
+ set_property(TARGET f2c PROPERTY PREFIX lib)
++if (COMMAND cotire)
++	cotire(f2c)
++endif()
+diff -rupN clapack-3.2.1-CMAKE/SRC/CMakeLists.txt clapack-3.2.1-CMAKE.cotire/SRC/CMakeLists.txt
+--- clapack-3.2.1-CMAKE/SRC/CMakeLists.txt	2009-08-10 19:47:54.000000000 +0200
+@@ -378,3 +378,9 @@ endif()
+ add_library(lapack ${ALLOBJ} ${ALLXOBJ})
+ target_link_libraries(lapack blas)
+ 
++if (COMMAND cotire)
++	cotire(lapack)
++	if (TARGET lapack_unity)
++		target_link_libraries(lapack_unity blas_unity)
++	endif()
++endif()
+diff -rupN clapack-3.2.1-CMAKE/TESTING/EIG/CMakeLists.txt clapack-3.2.1-CMAKE.cotire/TESTING/EIG/CMakeLists.txt
+--- clapack-3.2.1-CMAKE/TESTING/EIG/CMakeLists.txt	2009-08-10 19:47:54.000000000 +0200
+@@ -120,6 +120,12 @@ set(ZEIGTST  zchkee.c 
+ macro(add_eig_executable name )
+   add_executable(${name} ${ARGN})
+   target_link_libraries(${name} tmglib lapack )
++  if (COMMAND cotire)
++    cotire(${name})
++    if (TARGET ${name}_unity)
++      target_link_libraries(${name}_unity tmglib lapack )
++    endif()
++  endif()
+ endmacro(add_eig_executable)
+ 
+ add_eig_executable(xeigtsts ${SEIGTST} ${SCIGTST} ${AEIGTST} 
+diff -rupN clapack-3.2.1-CMAKE/TESTING/LIN/CMakeLists.txt clapack-3.2.1-CMAKE.cotire/TESTING/LIN/CMakeLists.txt
+--- clapack-3.2.1-CMAKE/TESTING/LIN/CMakeLists.txt	2009-08-10 20:06:06.000000000 +0200
+@@ -190,6 +190,12 @@ set(ZLINTSTRFP  zchkrfp.c zdrvrfp.c zdrv
+ macro(add_lin_executable name )
+   add_executable(${name} ${ARGN})
+   target_link_libraries(${name} tmglib lapack)
++  if (COMMAND cotire)
++    cotire(${name})
++    if (TARGET ${name}_unity)
++      target_link_libraries(${name}_unity tmglib lapack )
++    endif()
++  endif()
+ endmacro(add_lin_executable)
+ 
+ add_lin_executable(xlintsts ${ALINTST} ${SCLNTST} ${SLINTST} 
+diff -rupN clapack-3.2.1-CMAKE/TESTING/MATGEN/CMakeLists.txt clapack-3.2.1-CMAKE.cotire/TESTING/MATGEN/CMakeLists.txt
+--- clapack-3.2.1-CMAKE/TESTING/MATGEN/CMakeLists.txt	2009-08-10 19:47:54.000000000 +0200
+@@ -67,3 +67,6 @@ if(BUILD_COMPLEX16)
+ endif()
+ add_library(tmglib ${ALLOBJ} )
+ 
++if (COMMAND cotire)
++	cotire(tmglib)
++endif()

Patches/cmake-2.8.7.patch

@@ -0,0 +1,218 @@
+diff -rupN cmake-2.8.7/CMakeLists.txt cmake-2.8.7.cotire/CMakeLists.txt
+--- cmake-2.8.7/CMakeLists.txt	2011-12-30 17:49:56.000000000 +0100
+@@ -13,6 +13,8 @@ CMAKE_MINIMUM_REQUIRED(VERSION 2.6.3 FAT
+ SET(CMAKE_LEGACY_CYGWIN_WIN32 0) # Remove when CMake >= 2.8.4 is required
+ PROJECT(CMake)
+ 
++include(Modules/cotire.cmake)
++
+ IF(CMAKE_BOOTSTRAP)
+   # Running from bootstrap script.  Set local variable and remove from cache.
+   SET(CMAKE_BOOTSTRAP 1)
+diff -rupN cmake-2.8.7/Source/CMakeLists.txt cmake-2.8.7.cotire/Source/CMakeLists.txt
+--- cmake-2.8.7/Source/CMakeLists.txt	2011-12-30 17:49:56.000000000 +0100
+@@ -364,6 +364,9 @@ TARGET_LINK_LIBRARIES(CMakeLib cmsys
+ IF(APPLE)
+   TARGET_LINK_LIBRARIES(CMakeLib "-framework CoreFoundation")
+ ENDIF(APPLE)
++if (COMMAND cotire)
++cotire(CMakeLib)
++endif()
+ 
+ # On some platforms we need the rpcrt4 library for the VS 7 generators.
+ IF(CMAKE_BUILD_ON_VISUAL_STUDIO OR MINGW)
+@@ -433,6 +436,9 @@ SET(CTEST_SRCS cmCTest.cxx
+ # Build CTestLib
+ ADD_LIBRARY(CTestLib ${CTEST_SRCS})
+ TARGET_LINK_LIBRARIES(CTestLib CMakeLib ${CMAKE_CURL_LIBRARIES} ${CMAKE_XMLRPC_LIBRARIES})
++if (COMMAND cotire)
++cotire(CTestLib)
++endif()
+ 
+ #
+ # Sources for CPack
+@@ -477,6 +483,9 @@ ENDIF(APPLE)
+ # Build CPackLib
+ ADD_LIBRARY(CPackLib ${CPACK_SRCS})
+ TARGET_LINK_LIBRARIES(CPackLib CMakeLib)
++if (COMMAND cotire)
++cotire(CPackLib)
++endif()
+ 
+ IF(APPLE)
+   ADD_EXECUTABLE(cmakexbuild cmakexbuild.cxx)
+@@ -485,11 +494,17 @@ IF(APPLE)
+     CPack/OSXScriptLauncher.cxx)
+   TARGET_LINK_LIBRARIES(OSXScriptLauncher cmsys)
+   TARGET_LINK_LIBRARIES(OSXScriptLauncher "-framework CoreFoundation")
++if (COMMAND cotire)
++cotire(cmakexbuild)
++endif()
+ ENDIF(APPLE)
+ 
+ # Build CMake executable
+ ADD_EXECUTABLE(cmake cmakemain.cxx)
+ TARGET_LINK_LIBRARIES(cmake CMakeLib)
++if (COMMAND cotire)
++cotire(cmake)
++endif()
+ 
+ # Build special executable for running programs on Windows 98
+ IF(WIN32)
+@@ -503,10 +518,16 @@ ENDIF(WIN32)
+ # Build CTest executable
+ ADD_EXECUTABLE(ctest ctest.cxx)
+ TARGET_LINK_LIBRARIES(ctest CTestLib)
++if (COMMAND cotire)
++cotire(ctest)
++endif()
+ 
+ # Build CPack executable
+ ADD_EXECUTABLE(cpack CPack/cpack.cxx)
+ TARGET_LINK_LIBRARIES(cpack CPackLib)
++if (COMMAND cotire)
++cotire(cpack)
++endif()
+ 
+ # Curses GUI
+ IF(BUILD_CursesDialog)
+diff -rupN cmake-2.8.7/Source/CursesDialog/CMakeLists.txt cmake-2.8.7.cotire/Source/CursesDialog/CMakeLists.txt
+--- cmake-2.8.7/Source/CursesDialog/CMakeLists.txt	2011-12-30 17:49:57.000000000 +0100
+@@ -33,5 +33,7 @@ INCLUDE_DIRECTORIES(${CURSES_INCLUDE_PAT
+ ADD_EXECUTABLE(ccmake ${CURSES_SRCS} )
+ TARGET_LINK_LIBRARIES(ccmake CMakeLib)
+ TARGET_LINK_LIBRARIES(ccmake cmForm)
+-
++if (COMMAND cotire)
++cotire(ccmake)
++endif()
+ INSTALL_TARGETS(/bin ccmake)
+diff -rupN cmake-2.8.7/Source/CursesDialog/form/CMakeLists.txt cmake-2.8.7.cotire/Source/CursesDialog/form/CMakeLists.txt
+--- cmake-2.8.7/Source/CursesDialog/form/CMakeLists.txt	2011-12-30 17:49:57.000000000 +0100
+@@ -64,3 +64,6 @@ TARGET_LINK_LIBRARIES(cmForm ${CURSES_LI
+ IF(CURSES_EXTRA_LIBRARY)
+   TARGET_LINK_LIBRARIES(cmForm ${CURSES_EXTRA_LIBRARY})
+ ENDIF(CURSES_EXTRA_LIBRARY)
++if (COMMAND cotire)
++cotire(cmForm)
++endif()
+diff -rupN cmake-2.8.7/Source/kwsys/CMakeLists.txt cmake-2.8.7.cotire/Source/kwsys/CMakeLists.txt
+--- cmake-2.8.7/Source/kwsys/CMakeLists.txt	2011-12-30 17:49:57.000000000 +0100
+@@ -926,6 +926,9 @@ IF(KWSYS_STANDALONE OR CMake_SOURCE_DIR)
+       ADD_LIBRARY(${KWSYS_NAMESPACE}TestDynload MODULE testDynload.c)
+       SET_PROPERTY(TARGET ${KWSYS_NAMESPACE}TestDynload PROPERTY LABELS ${KWSYS_LABELS_LIB})
+       ADD_DEPENDENCIES(${KWSYS_NAMESPACE}TestDynload ${KWSYS_NAMESPACE})
++if (COMMAND cotire)
++cotire(${KWSYS_NAMESPACE}TestDynload)
++endif()
+     ENDIF(KWSYS_USE_DynamicLoader)
+     CREATE_TEST_SOURCELIST(
+       KWSYS_CXX_TEST_SRCS ${KWSYS_NAMESPACE}TestsCxx.cxx
+@@ -934,6 +937,9 @@ IF(KWSYS_STANDALONE OR CMake_SOURCE_DIR)
+     ADD_EXECUTABLE(${KWSYS_NAMESPACE}TestsCxx ${KWSYS_CXX_TEST_SRCS})
+     SET_PROPERTY(TARGET ${KWSYS_NAMESPACE}TestsCxx PROPERTY LABELS ${KWSYS_LABELS_EXE})
+     TARGET_LINK_LIBRARIES(${KWSYS_NAMESPACE}TestsCxx ${KWSYS_NAMESPACE})
++if (COMMAND cotire)
++cotire(${KWSYS_NAMESPACE}TestsCxx)
++endif()
+     SET(TEST_SYSTEMTOOLS_BIN_FILE
+       "${CMAKE_CURRENT_SOURCE_DIR}/testSystemTools.bin")
+     SET(TEST_SYSTEMTOOLS_SRC_FILE
+diff -rupN cmake-2.8.7/Utilities/cmbzip2/CMakeLists.txt cmake-2.8.7.cotire/Utilities/cmbzip2/CMakeLists.txt
+--- cmake-2.8.7/Utilities/cmbzip2/CMakeLists.txt	2011-12-30 17:49:58.000000000 +0100
+@@ -2,3 +2,6 @@ project(bzip2)
+ add_definitions(-D_FILE_OFFSET_BITS=64)
+ add_library(cmbzip2
+   blocksort.c huffman.c crctable.c randtable.c compress.c decompress.c bzlib.c)
++if (COMMAND cotire)
++cotire(cmbzip2)
++endif()
+\ No newline at end of file
+diff -rupN cmake-2.8.7/Utilities/cmcompress/CMakeLists.txt cmake-2.8.7.cotire/Utilities/cmcompress/CMakeLists.txt
+--- cmake-2.8.7/Utilities/cmcompress/CMakeLists.txt	2011-12-30 17:49:58.000000000 +0100
+@@ -3,3 +3,6 @@ PROJECT(CMCompress)
+ ADD_LIBRARY(cmcompress cmcompress.c)
+ 
+ INSTALL(FILES Copyright.txt DESTINATION ${CMake_DOC_DEST}/cmcompress)
++if (COMMAND cotire)
++cotire(cmcompress)
++endif()
+\ No newline at end of file
+diff -rupN cmake-2.8.7/Utilities/cmcurl/CMakeLists.txt cmake-2.8.7.cotire/Utilities/cmcurl/CMakeLists.txt
+--- cmake-2.8.7/Utilities/cmcurl/CMakeLists.txt	2011-12-30 17:49:58.000000000 +0100
+@@ -706,6 +706,9 @@ IF(CMAKE_BUILD_CURL_SHARED)
+     RUNTIME_OUTPUT_DIRECTORY ${CMake_BIN_DIR})
+   INSTALL_TARGETS(/bin cmcurl)
+ ENDIF(CMAKE_BUILD_CURL_SHARED)
++if (COMMAND cotire)
++cotire(cmcurl)
++endif()
+ 
+ OPTION(CURL_TESTING "Do libCurl testing" OFF)
+ IF(CURL_TESTING)
+diff -rupN cmake-2.8.7/Utilities/cmexpat/CMakeLists.txt cmake-2.8.7.cotire/Utilities/cmexpat/CMakeLists.txt
+--- cmake-2.8.7/Utilities/cmexpat/CMakeLists.txt	2011-12-30 17:49:58.000000000 +0100
+@@ -32,3 +32,6 @@ CONFIGURE_FILE(${CMEXPAT_SOURCE_DIR}/exp
+ 
+ ADD_LIBRARY(cmexpat ${expat_SRCS})
+ INSTALL(FILES COPYING DESTINATION ${CMake_DOC_DEST}/cmexpat)
++if (COMMAND cotire)
++cotire(cmexpat)
++endif()
+\ No newline at end of file
+diff -rupN cmake-2.8.7/Utilities/cmlibarchive/libarchive/CMakeLists.txt cmake-2.8.7.cotire/Utilities/cmlibarchive/libarchive/CMakeLists.txt
+--- cmake-2.8.7/Utilities/cmlibarchive/libarchive/CMakeLists.txt	2011-12-30 17:49:58.000000000 +0100
+@@ -116,6 +116,9 @@ IF(BUILD_ARCHIVE_WITHIN_CMAKE)
+   # and call the library cmlibarchive
+   ADD_LIBRARY(cmlibarchive STATIC ${libarchive_SOURCES} ${include_HEADERS})
+   TARGET_LINK_LIBRARIES(cmlibarchive ${ADDITIONAL_LIBS})
++if (COMMAND cotire)
++cotire(cmlibarchive)
++endif()
+ ELSE()
+   # Libarchive is a shared library
+   ADD_LIBRARY(archive SHARED ${libarchive_SOURCES} ${include_HEADERS})
+@@ -123,7 +126,10 @@ ELSE()
+   SET_TARGET_PROPERTIES(archive PROPERTIES SOVERSION ${SOVERSION})
+   SET_TARGET_PROPERTIES(archive PROPERTIES
+     RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR})
+-  
++if (COMMAND cotire)
++cotire(archive)
++endif()
++
+   # archive_static is a static library
+   ADD_LIBRARY(archive_static STATIC ${libarchive_SOURCES} ${include_HEADERS})
+   SET_TARGET_PROPERTIES(archive_static PROPERTIES COMPILE_DEFINITIONS
+@@ -134,6 +140,9 @@ ELSE()
+   IF(NOT WIN32 OR CYGWIN)
+     SET_TARGET_PROPERTIES(archive_static PROPERTIES OUTPUT_NAME archive)
+   ENDIF(NOT WIN32 OR CYGWIN)
++if (COMMAND cotire)
++cotire(archive_static)
++endif()
+   
+   # How to install the libraries
+   INSTALL(TARGETS archive archive_static
+diff -rupN cmake-2.8.7/Utilities/cmzlib/CMakeLists.txt cmake-2.8.7.cotire/Utilities/cmzlib/CMakeLists.txt
+--- cmake-2.8.7/Utilities/cmzlib/CMakeLists.txt	2011-12-30 17:49:58.000000000 +0100
+@@ -39,5 +39,7 @@ ENDFOREACH(name)
+ 
+ 
+ ADD_LIBRARY(cmzlib ${ZLIB_SRCS})
+-
++if (COMMAND cmzlib)
++cotire(cmzlib)
++endif()
+ INSTALL(FILES Copyright.txt DESTINATION ${CMake_DOC_DEST}/cmzlib)

Patches/cminpack-1.1.4.patch

@@ -0,0 +1,18 @@
+diff -rupN cminpack-1.1.4/CMakeLists.txt cminpack-1.1.4.cotire/CMakeLists.txt
+--- cminpack-1.1.4/CMakeLists.txt	2011-04-15 08:51:13.000000000 +0200
+@@ -6,6 +6,7 @@ project (CMINPACK)
+ string(TOLOWER ${PROJECT_NAME} PROJECT_NAME_LOWER)
+ 
+ include(${PROJECT_SOURCE_DIR}/cmake/cminpack_utils.cmake)
++include(${PROJECT_SOURCE_DIR}/cmake/cotire.cmake)
+ # Set version and OS-specific settings
+ set(CMINPACK_VERSION 1.0.90 CACHE STRING "CMinpack version")
+ DISSECT_VERSION()
+@@ -70,3 +71,6 @@ endif (USE_FPIC AND NOT SHARED_LIBS)
+ 
+ set_target_properties(cminpack PROPERTIES VERSION ${CMINPACK_VERSION})
+ 
++if (COMMAND cotire)
++  cotire(cminpack)
++endif()

Patches/hdf5-1.8.8.patch

@@ -0,0 +1,118 @@
+diff -rupN hdf5-1.8.8/CMakeLists.txt hdf5-1.8.8.cotire/CMakeLists.txt
+--- hdf5-1.8.8/CMakeLists.txt	2011-11-07 23:11:41.000000000 +0100
+@@ -200,6 +200,7 @@ SET (HDF5_PACKAGE_BUGREPORT "help@hdfgro
+ #-----------------------------------------------------------------------------
+ INCLUDE (${HDF5_RESOURCES_DIR}/HDFMacros.cmake)
+ INCLUDE (${HDF5_RESOURCES_DIR}/HDF5Macros.cmake)
++INCLUDE (${HDF5_RESOURCES_DIR}/cotire.cmake)
+ 
+ #-----------------------------------------------------------------------------
+ # Setup output Directories
+diff -rupN hdf5-1.8.8/c++/src/CMakeLists.txt hdf5-1.8.8.cotire/c++/src/CMakeLists.txt
+--- hdf5-1.8.8/c++/src/CMakeLists.txt	2011-11-07 23:11:40.000000000 +0100
+@@ -85,6 +85,9 @@ ADD_LIBRARY (${HDF5_CPP_LIB_TARGET} ${LI
+ TARGET_LINK_LIBRARIES (${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET})
+ SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_CPP_LIB_TARGET}")
+ H5_SET_LIB_OPTIONS (${HDF5_CPP_LIB_TARGET} ${HDF5_CPP_LIB_NAME} ${LIB_TYPE})
++if (COMMAND cotire)
++cotire(${HDF5_CPP_LIB_TARGET})
++endif()
+ 
+ #-----------------------------------------------------------------------------
+ # Add file(s) to CMake Install 
+diff -rupN hdf5-1.8.8/fortran/src/CMakeLists.txt hdf5-1.8.8.cotire/fortran/src/CMakeLists.txt
+--- hdf5-1.8.8/fortran/src/CMakeLists.txt	2011-11-07 23:11:41.000000000 +0100
+@@ -118,6 +118,9 @@ ADD_LIBRARY (${HDF5_F90_C_LIB_TARGET} ${
+ TARGET_LINK_LIBRARIES (${HDF5_F90_C_LIB_TARGET} ${HDF5_LIB_TARGET})
+ SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_F90_C_LIB_TARGET}")
+ H5_SET_LIB_OPTIONS (${HDF5_F90_C_LIB_TARGET} ${HDF5_F90_C_LIB_NAME} ${LIB_TYPE})
++if (COMMAND cotire)
++cotire(${HDF5_F90_C_LIB_TARGET})
++endif()
+ 
+ #-----------------------------------------------------------------------------
+ # Fortran 2003 standard
+@@ -221,6 +224,7 @@ SET_TARGET_PROPERTIES (${HDF5_F90_LIB_TA
+ TARGET_LINK_LIBRARIES (${HDF5_F90_LIB_TARGET} ${HDF5_F90_C_LIB_TARGET} ${HDF5_LIB_TARGET})
+ SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_F90_LIB_TARGET}")
+ H5_SET_LIB_OPTIONS (${HDF5_F90_LIB_TARGET} ${HDF5_F90_LIB_NAME} ${LIB_TYPE})
++cotire(${HDF5_F90_LIB_TARGET})
+ 
+ #-----------------------------------------------------------------------------
+ # Add file(s) to CMake Install
+diff -rupN hdf5-1.8.8/hl/c++/src/CMakeLists.txt hdf5-1.8.8.cotire/hl/c++/src/CMakeLists.txt
+--- hdf5-1.8.8/hl/c++/src/CMakeLists.txt	2011-11-07 23:11:39.000000000 +0100
+@@ -18,6 +18,9 @@ TARGET_LINK_LIBRARIES (
+ )
+ SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_HL_CPP_LIB_TARGET}")
+ H5_SET_LIB_OPTIONS (${HDF5_HL_CPP_LIB_TARGET} ${HDF5_HL_CPP_LIB_NAME} ${LIB_TYPE})
++if (COMMAND cotire)
++cotire(${HDF5_HL_CPP_LIB_TARGET})
++endif()
+ 
+ #-----------------------------------------------------------------------------
+ # Add file(s) to CMake Install 
+diff -rupN hdf5-1.8.8/hl/src/CMakeLists.txt hdf5-1.8.8.cotire/hl/src/CMakeLists.txt
+--- hdf5-1.8.8/hl/src/CMakeLists.txt	2011-11-07 23:11:38.000000000 +0100
+@@ -37,6 +37,9 @@ ADD_LIBRARY (${HDF5_HL_LIB_TARGET} ${LIB
+ TARGET_LINK_LIBRARIES (${HDF5_HL_LIB_TARGET} ${HDF5_LIB_TARGET})
+ SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_HL_LIB_TARGET}")
+ H5_SET_LIB_OPTIONS (${HDF5_HL_LIB_TARGET} ${HDF5_HL_LIB_NAME} ${LIB_TYPE})
++if (COMMAND cotire)
++cotire(${HDF5_HL_LIB_TARGET})
++endif()
+ 
+ #-----------------------------------------------------------------------------
+ # Add file(s) to CMake Install 
+diff -rupN hdf5-1.8.8/src/CMakeLists.txt hdf5-1.8.8.cotire/src/CMakeLists.txt
+--- hdf5-1.8.8/src/CMakeLists.txt	2011-11-07 23:11:30.000000000 +0100
+@@ -631,6 +631,16 @@ ADD_LIBRARY (${HDF5_LIB_TARGET} ${LIB_TY
+ TARGET_LINK_LIBRARIES (${HDF5_LIB_TARGET} ${LINK_LIBS})
+ SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT ${HDF5_LIB_TARGET})
+ H5_SET_LIB_OPTIONS (${HDF5_LIB_TARGET} ${HDF5_LIB_NAME} ${LIB_TYPE})
++#set_target_properties(${HDF5_LIB_TARGET} PROPERTIES COTIRE_IGNORED_INCLUDE_DIRECTORIES "/Developer/usr;/usr/llvm-gcc-4.2;${CMAKE_SOURCE_DIR};${CMAKE_BINARY_DIR}")
++
++if (COMMAND cotire)
++SET_SOURCE_FILES_PROPERTIES (
++"${HDF5_BINARY_DIR}/H5overflow.h"
++"${HDF5_BINARY_DIR}/H5version.h"
++"${HDF5_BINARY_DIR}/H5Edefin.h"
++PROPERTIES COTIRE_DEPENDENCY FALSE)
++cotire(${HDF5_LIB_TARGET})
++endif()
+ 
+ #-----------------------------------------------------------------------------
+ # Add file(s) to CMake Install
+Binary files hdf5-1.8.8/src/H5public.h.gch and hdf5-1.8.8.cotire/src/H5public.h.gch differ
+diff -rupN hdf5-1.8.8/test/CMakeLists.txt hdf5-1.8.8.cotire/test/CMakeLists.txt
+--- hdf5-1.8.8/test/CMakeLists.txt	2011-11-07 23:11:23.000000000 +0100
+@@ -30,6 +30,9 @@ IF (MINGW)
+ ENDIF (MINGW)
+ TARGET_LINK_LIBRARIES (${HDF5_TEST_LIB_TARGET} ${HDF5_LIB_TARGET})
+ H5_SET_LIB_OPTIONS (${HDF5_TEST_LIB_TARGET} ${HDF5_TEST_LIB_NAME} ${LIB_TYPE})
++if (COMMAND cotire)
++cotire(${HDF5_TEST_LIB_TARGET})
++endif()
+ 
+ # --------------------------------------------------------------------
+ # Copy all the HDF5 files from the test directory into the source directory
+diff -rupN hdf5-1.8.8/tools/lib/CMakeLists.txt hdf5-1.8.8.cotire/tools/lib/CMakeLists.txt
+--- hdf5-1.8.8/tools/lib/CMakeLists.txt	2011-11-07 23:11:35.000000000 +0100
+@@ -40,6 +40,9 @@ H5_SET_LIB_OPTIONS (
+     HDF5_TOOLS_LIB_NAME_RELEASE
+   HDF5_TOOLS_LIB_NAME_DEBUG
+ )
++if (COMMAND cotire)
++cotire(${HDF5_TOOLS_LIB_TARGET})
++endif()
+ 
+ ##############################################################################
+ ##############################################################################

Patches/libpng-1.5.9.patch

@@ -0,0 +1,38 @@
+diff -rupN libpng-1.5.9/CMakeLists.txt libpng-1.5.9.cotire/CMakeLists.txt
+--- libpng-1.5.9/CMakeLists.txt	2012-02-18 21:31:14.000000000 +0100
+@@ -9,6 +9,8 @@
+ cmake_minimum_required(VERSION 2.4.4)
+ set(CMAKE_ALLOW_LOOSE_LOOP_CONSTRUCTS true)
+ 
++include("${CMAKE_SOURCE_DIR}/cotire.cmake")
++
+ if(UNIX AND NOT DEFINED CMAKE_BUILD_TYPE)
+   if(CMAKE_MAJOR_VERSION EQUAL 2 AND CMAKE_MINOR_VERSION EQUAL 4)
+     # workaround CMake 2.4.x bug
+@@ -146,6 +148,12 @@ if(PNG_SHARED)
+     set_target_properties(${PNG_LIB_NAME} PROPERTIES IMPORT_PREFIX "lib")
+   endif()
+   target_link_libraries(${PNG_LIB_NAME} ${ZLIB_LIBRARY} ${M_LIBRARY})
++  if (COMMAND cotire)
++    cotire(${PNG_LIB_NAME})
++    if (TARGET ${PNG_LIB_NAME}_unity)
++      target_link_libraries(${PNG_LIB_NAME}_unity ${ZLIB_LIBRARY} ${M_LIBRARY})
++    endif()
++  endif()
+ endif()
+ 
+ if(PNG_STATIC)
+@@ -157,6 +165,12 @@ if(PNG_STATIC)
+     set_target_properties(${PNG_LIB_NAME_STATIC} PROPERTIES PREFIX "lib")
+   endif()
+   target_link_libraries(${PNG_LIB_NAME_STATIC} ${ZLIB_LIBRARY} ${M_LIBRARY})
++  if (COMMAND cotire)
++    cotire(${PNG_LIB_NAME_STATIC})
++    if (TARGET ${PNG_LIB_NAME_STATIC}_unity)
++      target_link_libraries(${PNG_LIB_NAME_STATIC}_unity ${ZLIB_LIBRARY} ${M_LIBRARY})
++    endif()
++  endif()
+ endif()
+ 
+ if(PNG_SHARED AND WIN32)

Patches/llvm-3.0.src.patch

@@ -0,0 +1,58 @@
+diff -rupN llvm-3.0.src/CMakeLists.txt llvm-3.0.src.cotire/CMakeLists.txt
+--- llvm-3.0.src/CMakeLists.txt	2011-10-06 03:51:51.000000000 +0200
+@@ -15,6 +15,7 @@ set(PACKAGE_VERSION "3.0")
+ set_property(GLOBAL PROPERTY USE_FOLDERS ON)
+ 
+ include(VersionFromVCS)
++include(cotire)
+ 
+ option(LLVM_APPEND_VC_REV
+   "Append the version control system revision id to LLVM version" OFF)
+diff -rupN llvm-3.0.src/cmake/modules/AddLLVM.cmake llvm-3.0.src.cotire/cmake/modules/AddLLVM.cmake
+--- llvm-3.0.src/cmake/modules/AddLLVM.cmake	2011-07-30 10:47:05.000000000 +0200
+@@ -25,6 +25,9 @@ macro(add_llvm_library name)
+       ARCHIVE DESTINATION lib${LLVM_LIBDIR_SUFFIX})
+   endif()
+   set_target_properties(${name} PROPERTIES FOLDER "Libraries")
++  if (COMMAND cotire)
++      cotire(${name})
++  endif()
+ endmacro(add_llvm_library name)
+ 
+ macro(add_llvm_library_dependencies name)
+@@ -69,6 +72,9 @@ ${name} ignored.")
+ 	LIBRARY DESTINATION lib${LLVM_LIBDIR_SUFFIX}
+ 	ARCHIVE DESTINATION lib${LLVM_LIBDIR_SUFFIX})
+     endif()
++    if (COMMAND cotire)
++       cotire(${name})
++    endif()
+   endif()
+ 
+   set_target_properties(${name} PROPERTIES FOLDER "Loadable modules")
+@@ -89,6 +95,9 @@ macro(add_llvm_executable name)
+     add_dependencies( ${name} ${LLVM_COMMON_DEPENDS} )
+   endif( LLVM_COMMON_DEPENDS )
+   link_system_libs( ${name} )
++  if (COMMAND cotire)
++      cotire(${name})
++  endif()
+ endmacro(add_llvm_executable name)
+ 
+ 
+diff -rupN llvm-3.0.src/lib/Support/CMakeLists.txt llvm-3.0.src.cotire/lib/Support/CMakeLists.txt
+--- llvm-3.0.src/lib/Support/CMakeLists.txt	2011-09-13 21:42:16.000000000 +0200
+@@ -4,6 +4,10 @@ if( MINGW )
+   set(LLVM_REQUIRES_EH 1)
+ endif()
+ 
++if (COMMAND cotire)
++	set_source_files_properties (IsInf.cpp IsNAN.cpp PROPERTIES COTIRE_EXCLUDED TRUE)
++endif()
++
+ add_llvm_library(LLVMSupport
+   APFloat.cpp
+   APInt.cpp

Patches/yaml-cpp.patch

@@ -0,0 +1,37 @@
+diff -rupN yaml-cpp/CMakeLists.txt yaml-cpp-cotire/CMakeLists.txt
+--- yaml-cpp/CMakeLists.txt	2012-01-21 09:52:48.000000000 +0100
+@@ -14,6 +14,7 @@ if(POLICY CMP0015)
+ endif()
+ 
+ include(CheckCXXCompilerFlag)
++include("${CMAKE_SOURCE_DIR}/cotire.cmake")
+ 
+ 
+ ###
+@@ -235,6 +236,7 @@ add_library(yaml-cpp
+ 	${contrib_private_headers}
+ )
+ 
++cotire(yaml-cpp)
+ set_target_properties(yaml-cpp PROPERTIES
+ 	VERSION "${YAML_CPP_VERSION}"
+ 	SOVERSION "${YAML_CPP_VERSION_MAJOR}.${YAML_CPP_VERSION_MINOR}"
+diff -rupN yaml-cpp/test/CMakeLists.txt yaml-cpp-cotire/test/CMakeLists.txt
+--- yaml-cpp/test/CMakeLists.txt	2012-01-21 09:52:48.000000000 +0100
+@@ -13,3 +13,5 @@ add_executable(run-tests
+ target_link_libraries(run-tests yaml-cpp)
+ 
+ add_test(yaml-reader-test run-tests)
++
++cotire(run-tests)
+\ No newline at end of file
+diff -rupN yaml-cpp/util/CMakeLists.txt yaml-cpp-cotire/util/CMakeLists.txt
+--- yaml-cpp/util/CMakeLists.txt	2012-01-21 09:52:48.000000000 +0100
+@@ -1,2 +1,3 @@
+ add_executable(parse parse.cpp)
+ target_link_libraries(parse yaml-cpp)
++cotire(parse)
+\ No newline at end of file

Patches/zlib-1.2.6.patch

@@ -0,0 +1,23 @@
+diff -rupN zlib-1.2.6/CMakeLists.txt zlib-1.2.6.cotire/CMakeLists.txt
+--- zlib-1.2.6/CMakeLists.txt	2012-01-17 03:51:23.000000000 +0100
+@@ -7,6 +7,8 @@ if(NOT DEFINED BUILD_SHARED_LIBS)
+     option(BUILD_SHARED_LIBS "Build a shared library form of zlib" ON)
+ endif()
+ 
++include("${CMAKE_SOURCE_DIR}/cotire.cmake") 
++
+ include(CheckTypeSize)
+ include(CheckFunctionExists)
+ include(CheckIncludeFile)
+@@ -176,6 +178,10 @@ if(NOT SKIP_INSTALL_FILES AND NOT SKIP_I
+     install(FILES zlib.3 DESTINATION share/man/man3)
+ endif()
+ 
++if (COMMAND cotire)
++	cotire(zlib)
++endif()
++
+ #============================================================================
+ # Example binaries
+ #============================================================================

README.md

@@ -79,6 +79,9 @@ the original target, but does so much faster by entering:
 See the advanced usage section of the [cotire manual][manual] for information on how to
 configure the cotire process (e.g., how to apply cotire to a certain build configuration only).
 
+The directory `Patches` contains patch files to enable cotire for some popular open sources
+packages that use CMake as a build system.
+
 speedup
 -------